Additional B-precursor acute lymphoblastic leukemia (B-ALL) bone marrow samples were added as a new diagnostic class. This model now contains samples from three diagnostic classes (T-ALL, T-LL and B-ALL).
Platform: Affymetrix GeneChip Human Genome U133 Array Set HG-U133A
Number of genes: 15434 Number of samples: 29 Note: From the originally measured 22283 probe sets we removed genes that were not present (P) in at least one sample
Predictive accuracy with 10-fold cross validation (classifying using the best projection with eight attributes):
Following are the three best-ranked visualization with eight, six and four attributes in respect to the visualization score, that is, visualizations where examples from different diagnostic classes are best separated:
Score: 99.98% Genes: 202112_at: von Willebrand factor, VWF 209121_x_at: nuclear receptor subfamily 2, group F, member 2, NR2F2 209120_at: nuclear receptor subfamily 2, group F, member 2, NR2F2 210788_s_at: dehydrogenase/reductase (SDR family) member 7, DHRS7 210715_s_at: serine protease inhibitor, Kunitz type, 2, SPINT2 209009_at: esterase D/formylglutathione hydrolase, ESD 203380_x_at: splicing factor, arginine/serine-rich 5, SFRS5 200092_s_at: ribosomal protein L37 /// ribosomal protein L37, RPL37
Score: 99.98% Genes: 202112_at: von Willebrand factor, VWF 204570_at: cytochrome c oxidase subunit VIIa polypeptide 1 (muscle), COX7A1 210788_s_at: dehydrogenase/reductase (SDR family) member 7, DHRS7 210715_s_at: serine protease inhibitor, Kunitz type, 2, SPINT2 200092_s_at: ribosomal protein L37 /// ribosomal protein L37, RPL37 203380_x_at: splicing factor, arginine/serine-rich 5, SFRS5