Stubbe, JoAnne
Publication with MATCHING institution:
- Stubbe J (1990) Ribonucleotide reductases. None. [IF=None, Cited=50, 2407066].
- Stubbe J, van der Donk WA (1995) Ribonucleotide reductases: radical enzymes with suicidal tendencies. None. [IF=None,
Cited=75, 8807812].
- Stubbe J, Cotruvo JA (2011) Control of metallation and active cofactor assembly in the class Ia and Ib ribonucleotide
reductases: diiron or dimanganese? Current Opinion in Chemical Biology. [IF=1.51, Cited=16, 21216656].
- Mühlenhoff U, Molik S, Godoy JR, ..., Lill R (2010) Cytosolic monothiol glutaredoxins function in intracellular iron
sensing and trafficking via their bound iron-sulfur cluster. None. [IF=None, Cited=190, 20889129].
- Stubbe J (2000) Ribonucleotide reductases: the link between an RNA and a DNA world? Current Opinion in Structural
Biology. [IF=1.4, Cited=45, 11114511].
- Stubbe J, Johnson L (2000) Clarity through structures. Editorial overview. Current Opinion in Structural Biology.
[IF=1.4, Cited=0, 11114508].
- Stubbe J, Johnson L (1996) Catalysis and regulation. Current Opinion in Structural Biology. [IF=1.4, Cited=0, 9000033].
- Stubbe J, Ge J, Yee CS (2001) The evolution of ribonucleotide reduction revisited. Trends in Biochemical Sciences.
[IF=2.462, Cited=42, 11166566].
- Stubbe J, Riggs-Gelasco P (1998) Harnessing free radicals: formation and function of the tyrosyl radical in
ribonucleotide reductase. Trends in Biochemical Sciences. [IF=2.462, Cited=68, 9852763].
- Stubbe J (2003) Di-iron-tyrosyl radical ribonucleotide reductases. Current Opinion in Chemical Biology. [IF=1.51,
Cited=73, 12714050].
- Ravichandran K, Olshansky L, Nocera DG, Stubbe J (2020) Subunit Interaction Dynamics of Class Ia Ribonucleotide
Reductases: In Search of a Robust Assay. Biochemistry. [IF=0.753, Cited=9, 32186371].
- O'Reilly M, Stubbe J (2020) PET Polymer Recycling. Biochemistry. [IF=0.753, Cited=1, 32559062].
- Nick TU, Ravichandran KR, Stubbe J, ..., Bennati M (2017) Spectroscopic Evidence for a H Bond Network at Y356
Located at the Subunit Interface of Active E. coli Ribonucleotide Reductase. Biochemistry. [IF=0.753, Cited=18, 28640584].
- Stubbe J, Seyedsayamdost MR (2018) Discovery of a New Class I Ribonucleotide Reductase with an Essential DOPA Radical
and NO Metal as an Initiator of Long-Range Radical Transfer. Biochemistry. [IF=0.753, Cited=4, 30586288].
- Reinhardt CR, Li P, Kang G, ..., Hammes-Schiffer S (2020) Conformational Motions and Water Networks at the α/β Interface
in E. coli Ribonucleotide Reductase. Journal of the American Chemical Society. [IF=2.573, Cited=14, 32631052].
- Cui C, Greene BL, Kang G, ..., Nocera DG (2020) Gated Proton Release during Radical Transfer at the Subunit Interface of
Ribonucleotide Reductase. Journal of the American Chemical Society. [IF=2.573, Cited=9, 33353307].
- Hecker F, Stubbe J, Bennati M (2021) Detection of Water Molecules on the Radical Transfer Pathway of Ribonucleotide
Reductase by 17O Electron-Nuclear Double Resonance Spectroscopy. Journal of the American Chemical Society.
[IF=2.573, Cited=11, 33957040].
- Meyer A, Kehl A, Cui C, ..., Bennati M (2022) 19F Electron-Nuclear Double Resonance Reveals Interaction
between Redox-Active Tyrosines across the α/β Interface of E. coli Ribonucleotide Reductase. Journal of the
American Chemical Society. [IF=2.573, Cited=5, 35652913].
- Cui C, Song DY, Drennan CL, ..., Nocera DG (2023) Radical Transport Facilitated by a Proton Transfer Network at the
Subunit Interface of Ribonucleotide Reductase. Journal of the American Chemical Society. [IF=2.573, Cited=1, 36812162].
- Greene BL, Taguchi AT, Stubbe J, Nocera DG (2017) Conformationally Dynamic Radical Transfer within Ribonucleotide
Reductase. Journal of the American Chemical Society. [IF=2.573, Cited=25, 29037038].
- Olshansky L, Greene BL, Finkbeiner C, ..., Nocera DG (2016) Photochemical Generation of a Tryptophan Radical within the
Subunit Interface of Ribonucleotide Reductase. Biochemistry. [IF=0.753, Cited=10, 27159163].
- Jia Y, Yuan W, Wodzinska J, ..., Stubbe J (2001) Mechanistic studies on class I polyhydroxybutyrate (PHB) synthase from
Ralstonia eutropha: class I and III synthases share a similar catalytic mechanism. Biochemistry. [IF=0.753, Cited=40, 11170423].
- Hoehn ST, Junker HD, Bunt RC, ..., Stubbe J (2001) Solution structure of Co(III)-bleomycin-OOH bound to a
phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry. [IF=0.753, Cited=25, 11352724].
- Stubbe J (1988) Radicals in biological catalysis. Biochemistry. [IF=0.753, Cited=22, 3046660].
- Chen D, Abend A, Stubbe J, Frey PA (2003) Epimerization at carbon-5' of (5'R)-[5'-2H]adenosylcobalamin by ribonucleoside
triphosphate reductase: cysteine 408-independent cleavage of the Co-C5' bond. Biochemistry. [IF=0.753, Cited=12, 12693955].
- Yee CS, Seyedsayamdost MR, Chang MCY, ..., Stubbe J (2003) Generation of the R2 subunit of ribonucleotide reductase by
intein chemistry: insertion of 3-nitrotyrosine at residue 356 as a probe of the radical initiation process.
Biochemistry. [IF=0.753, Cited=52, 14661967].
- Tian J, Sinskey AJ, Stubbe J (2005) Detection of intermediates from the polymerization reaction catalyzed by a D302A
mutant of class III polyhydroxyalkanoate (PHA) synthase. Biochemistry. [IF=0.753, Cited=17, 15683234].
- Davydov R, Behrouzian B, Smoukov S, ..., Shanklin J (2005) Effect of substrate on the diiron(III) site in stearoyl acyl
carrier protein delta 9-desaturase as disclosed by cryoreduction electron paramagnetic resonance/electron nuclear double
resonance spectroscopy. Biochemistry. [IF=0.753, Cited=10, 15667224].
- Hoskins AA, Anand R, Ealick SE, Stubbe J (2004) The formylglycinamide ribonucleotide amidotransferase complex from
Bacillus subtilis: metabolite-mediated complex formation. Biochemistry. [IF=0.753, Cited=16, 15301530].
- Anand R, Hoskins AA, Bennett EM, ..., Ealick SE (2004) A model for the Bacillus subtilis formylglycinamide
ribonucleotide amidotransferase multiprotein complex. Biochemistry. [IF=0.753, Cited=15, 15301532].
- Anand R, Hoskins AA, Stubbe J, Ealick SE (2004) Domain organization of Salmonella typhimurium formylglycinamide
ribonucleotide amidotransferase revealed by X-ray crystallography. Biochemistry. [IF=0.753, Cited=34, 15301531].
- Sommerhalter M, Voegtli WC, Perlstein DL, ..., Rosenzweig AC (2004) Structures of the yeast ribonucleotide reductase
Rnr2 and Rnr4 homodimers. Biochemistry. [IF=0.753, Cited=25, 15196016].
- Chen J, Stubbe J (2004) Synthesis and characterization of oligonucleotides containing a 4'-keto abasic site.
Biochemistry. [IF=0.753, Cited=16, 15122893].
- Tian J, Sinskey AJ, Stubbe J (2005) Class III polyhydroxybutyrate synthase: involvement in chain termination and
reinitiation. Biochemistry. [IF=0.753, Cited=12, 15938626].
- Perlstein DL, Ge J, Ortigosa AD, ..., Stubbe J (2005) The active form of the Saccharomyces cerevisiae ribonucleotide
reductase small subunit is a heterodimer in vitro and in vivo. Biochemistry. [IF=0.753, Cited=27, 16285741].
- Ortigosa AD, Hristova D, Perlstein DL, ..., Stubbe J (2006) Determination of the in vivo stoichiometry of tyrosyl
radical per betabeta' in Saccharomyces cerevisiae ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=18, 17014081].
- Morar M, Anand R, Hoskins AA, ..., Ealick SE (2006) Complexed structures of formylglycinamide ribonucleotide
amidotransferase from Thermotoga maritima describe a novel ATP binding protein superfamily. Biochemistry. [IF=0.753,
Cited=23, 17154526].
- Cotruvo JA, Stubbe J (2011) Escherichia coli class Ib ribonucleotide reductase contains a dimanganese(III)-tyrosyl
radical cofactor in vivo. Biochemistry. [IF=0.753, Cited=56, 21250660].
- Zhang Y, Stubbe J (2011) Bacillus subtilis class Ib ribonucleotide reductase is a dimanganese(III)-tyrosyl radical
enzyme. Biochemistry. [IF=0.753, Cited=37, 21561096].
- Cho M, Brigham CJ, Sinskey AJ, Stubbe J (2012) Purification of polyhydroxybutyrate synthase from its native organism,
Ralstonia eutropha: implications for the initiation and elongation of polymer formation in vivo. Biochemistry.
[IF=0.753, Cited=20, 22369488].
- Parker MJ, Zhu X, Stubbe J (2014) Bacillus subtilis class Ib ribonucleotide reductase: high activity and dynamic subunit
interactions. Biochemistry. [IF=0.753, Cited=11, 24401092].
- Ravichandran KR, Liang L, Stubbe J, Tommos C (2013) Formal reduction potential of 3,5-difluorotyrosine in a structured
protein: insight into multistep radical transfer. Biochemistry. [IF=0.753, Cited=20, 24228716].
- Buckley RM, Stubbe J (2015) Chemistry with an artificial primer of polyhydroxybutyrate synthase suggests a mechanism for
chain termination. Biochemistry. [IF=0.753, Cited=5, 25741756].
- Chen J, Dupradeau FY, Case DA, ..., Stubbe J (2007) Nuclear magnetic resonance structural studies and molecular modeling
of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry. [IF=0.753, Cited=12, 17323932].
- Hoskins AA, Morar M, Kappock TJ, ..., Stubbe J (2007) N5-CAIR mutase: role of a CO2 binding site and substrate movement
in catalysis. Biochemistry. [IF=0.753, Cited=18, 17298082].
- Wu CH, Jiang W, Krebs C, Stubbe J (2007) YfaE, a ferredoxin involved in diferric-tyrosyl radical maintenance in
Escherichia coli ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=37, 17880186].
- Hristova D, Wu CH, Jiang W, ..., Stubbe J (2008) Importance of the maintenance pathway in the regulation of the activity
of Escherichia coli ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=28, 18314964].
- Morar M, Hoskins AA, Stubbe J, Ealick SE (2008) Formylglycinamide ribonucleotide amidotransferase from Thermotoga
maritima: structural insights into complex formation. Biochemistry. [IF=0.753, Cited=12, 18597481].
- Hassan AQ, Wang Y, Plate L, Stubbe J (2008) Methodology to probe subunit interactions in ribonucleotide reductases.
Biochemistry. [IF=0.753, Cited=12, 19012414].
- Tong W, Burdi D, Riggs-Gelasco P, ..., Tainer J (1998) Characterization of Y122F R2 of Escherichia coli ribonucleotide
reductase by time-resolved physical biochemical methods and X-ray crystallography. Biochemistry. [IF=0.753, Cited=13, 9558317].
- Wang W, Kappock TJ, Stubbe J, Ealick SE (1998) X-ray crystal structure of glycinamide ribonucleotide synthetase from
Escherichia coli. Biochemistry. [IF=0.753, Cited=29, 9843369].
- Müh U, Sinskey AJ, Kirby DP, ..., Stubbe J (1999) PHA synthase from chromatium vinosum: cysteine 149 is involved in
covalent catalysis. Biochemistry. [IF=0.753, Cited=45, 9888824].
- Licht SS, Booker S, Stubbe J (1999) Studies on the catalysis of carbon-cobalt bond homolysis by ribonucleoside
triphosphate reductase: evidence for concerted carbon-cobalt bond homolysis and thiyl radical formation. Biochemistry.
[IF=0.753, Cited=22, 9930982].
- Licht SS, Lawrence CC, Stubbe J (1999) Thermodynamic and kinetic studies on carbon-cobalt bond homolysis by
ribonucleoside triphosphate reductase: the importance of entropy in catalysis. Biochemistry. [IF=0.753, Cited=21, 9930983].
- Meyer E, Kappock TJ, Osuji C, Stubbe J (1999) Evidence for the direct transfer of the carboxylate of
N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to generate 4-carboxy-5-aminoimidazole ribonucleotide catalyzed by
Escherichia coli PurE, an N5-CAIR mutase. Biochemistry. [IF=0.753, Cited=26, 10074353].
- Mueller EJ, Oh S, Kavalerchik E, ..., Stubbe J (1999) Investigation of the ATP binding site of Escherichia coli
aminoimidazole ribonucleotide synthetase using affinity labeling and site-directed mutagenesis. Biochemistry. [IF=0.753,
Cited=9, 10433689].
- Thoden JB, Kappock TJ, Stubbe J, Holden HM (1999) Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide
synthetase: a member of the ATP grasp protein superfamily. Biochemistry. [IF=0.753, Cited=32, 10569930].
- Jia Y, Kappock TJ, Frick T, ..., Stubbe J (2000) Lipases provide a new mechanistic model for polyhydroxybutyrate (PHB)
synthases: characterization of the functional residues in Chromatium vinosum PHB synthase. Biochemistry. [IF=0.753,
Cited=51, 10747780].
- Lawrence AG, Choi J, Rha C, ..., Sinskey AJ (2005) In vitro analysis of the chain termination reaction in the synthesis
of poly-(R)-beta-hydroxybutyrate by the class III synthase from Allochromatium vinosum. Biomacromolecules. [IF=1.112,
Cited=15, 16004452].
- Stubbe J, Nocera DG, Yee CS, Chang MCY (2003) Radical initiation in the class I ribonucleotide reductase: long-range
proton-coupled electron transfer? Chemical Reviews. [IF=11.712, Cited=371, 12797828].
- Stubbe J (1998) Protein Radicals in Enzyme Catalysis. Chemical Reviews. [IF=11.712, Cited=557, 11848913].
- Bar G, Bennati M, Nguyen HH, ..., Griffin RG (2001) High-frequency (140-GHz) time domain EPR and ENDOR spectroscopy: the
tyrosyl radical-diiron cofactor in ribonucleotide reductase from yeast. Journal of the American Chemical Society.
[IF=2.573, Cited=21, 11472128].
- Bennati M, Weber A, Antonic J, ..., Stubbe J (2003) Pulsed ELDOR spectroscopy measures the distance between the two
tyrosyl dadicals in the R2 subunit of the E. coli ribonucleotide reductase. Journal of the American Chemical Society.
[IF=2.573, Cited=33, 14653724].
- Yee CS, Chang MCY, Ge J, ..., Stubbe J (2003) 2,3-difluorotyrosine at position 356 of ribonucleotide reductase R2: a
probe of long-range proton-coupled electron transfer. Journal of the American Chemical Society. [IF=2.573, Cited=35, 12940718].
- Fritscher J, Artin E, Wnuk S, ..., Stubbe J (2005) Structure of the nitrogen-centered radical formed during inactivation
of E. coli ribonucleotide reductase by 2'-azido-2'-deoxyuridine-5'-diphosphate: trapping of the 3'-ketonucleotide.
Journal of the American Chemical Society. [IF=2.573, Cited=28, 15913363].
- Chang MCY, Yee CS, Nocera DG, Stubbe J (2004) Site-specific replacement of a conserved tyrosine in ribonucleotide
reductase with an aniline amino acid: a mechanistic probe for a redox-active tyrosine. Journal of the American Chemical
Society. [IF=2.573, Cited=19, 15612690].
- Bennati M, Robblee JH, Mugnaini V, ..., Borbat P (2005) EPR distance measurements support a model for long-range radical
initiation in E. coli ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=55, 16248626].
- Seyedsayamdost MR, Reece SY, Nocera DG, Stubbe J (2006) Mono-, di-, tri-, and tetra-substituted fluorotyrosines: new
probes for enzymes that use tyrosyl radicals in catalysis. Journal of the American Chemical Society. [IF=2.573,
Cited=73, 16448128].
- Seyedsayamdost MR, Yee CS, Reece SY, ..., Stubbe J (2006) pH Rate profiles of FnY356-R2s (n = 2, 3, 4) in Escherichia
coli ribonucleotide reductase: evidence that Y356 is a redox-active amino acid along the radical propagation pathway.
Journal of the American Chemical Society. [IF=2.573, Cited=70, 16448127].
- Seyedsayamdost MR, Stubbe J (2006) Site-specific replacement of Y356 with 3,4-dihydroxyphenylalanine in the beta2
subunit of E. coli ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=56, 16492021].
- Reece SY, Seyedsayamdost MR, Stubbe J, Nocera DG (2006) Electron transfer reactions of fluorotyrosyl radicals. Journal
of the American Chemical Society. [IF=2.573, Cited=22, 17044670].
- Seyedsayamdost MR, Stubbe J (2007) Forward and reverse electron transfer with the Y356DOPA-beta2 heterodimer of E. coli
ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=23, 17279757].
- Reece SY, Seyedsayamdost MR, Stubbe J, Nocera DG (2007) Direct observation of a transient tyrosine radical competent for
initiating turnover in a photochemical ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573,
Cited=32, 17944464].
- Seyedsayamdost MR, Xie J, Chan CTY, ..., Stubbe J (2007) Site-specific insertion of 3-aminotyrosine into subunit alpha2
of E. coli ribonucleotide reductase: direct evidence for involvement of Y730 and Y731 in radical propagation. Journal of
the American Chemical Society. [IF=2.573, Cited=84, 17990884].
- Seyedsayamdost MR, Chan CTY, Mugnaini V, ..., Bennati M (2007) PELDOR spectroscopy with DOPA-beta2 and NH2Y-alpha2s:
distance measurements between residues involved in the radical propagation pathway of E. coli ribonucleotide reductase.
Journal of the American Chemical Society. [IF=2.573, Cited=48, 18047343].
- Yokoyama K, Uhlin U, Stubbe J (2010) Site-specific incorporation of 3-nitrotyrosine as a probe of pKa perturbation of
redox-active tyrosines in ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=52, 20518462].
- Yokoyama K, Uhlin U, Stubbe J (2010) A hot oxidant, 3-NO2Y122 radical, unmasks conformational gating in ribonucleotide
reductase. Journal of the American Chemical Society. [IF=2.573, Cited=38, 20929229].
- Yokoyama K, Smith AA, Corzilius B, ..., Stubbe J (2011) Equilibration of tyrosyl radicals (Y356•, Y731•, Y730•) in the
radical propagation pathway of the Escherichia coli class Ia ribonucleotide reductase. Journal of the American Chemical
Society. [IF=2.573, Cited=48, 21967342].
- Holder PG, Pizano AA, Anderson BL, ..., Nocera DG (2012) Deciphering radical transport in the large subunit of class I
ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=24, 22121977].
- Argirević T, Riplinger C, Stubbe J, ..., Bennati M (2012) ENDOR spectroscopy and DFT calculations: evidence for the
hydrogen-bond network within α2 in the PCET of E. coli ribonucleotide reductase. Journal of the American Chemical
Society. [IF=2.573, Cited=38, 23072506].
- Wörsdörfer B, Conner DA, Yokoyama K, ..., Krebs C (2013) Function of the diiron cluster of Escherichia coli class Ia
ribonucleotide reductase in proton-coupled electron transfer. Journal of the American Chemical Society. [IF=2.573,
Cited=35, 23676140].
- Pizano AA, Olshansky L, Holder PG, ..., Nocera DG (2013) Modulation of Y356 photooxidation in E. coli class Ia
ribonucleotide reductase by Y731 across the α2:β2 interface. Journal of the American Chemical Society. [IF=2.573,
Cited=10, 23927429].
- Wei Y, Mathies G, Yokoyama K, ..., Stubbe J (2014) A chemically competent thiosulfuranyl radical on the Escherichia coli
class III ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=23, 24827372].
- Olshansky L, Pizano AA, Wei Y, ..., Nocera DG (2014) Kinetics of hydrogen atom abstraction from substrate by an active
site thiyl radical in ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=22, 25353063].
- Nick TU, Lee W, Kossmann S, ..., Bennati M (2014) Hydrogen bond network between amino acid radical intermediates on the
proton-coupled electron transfer pathway of E. coli α2 ribonucleotide reductase. Journal of the American Chemical
Society. [IF=2.573, Cited=36, 25516424].
- Zipse H, Artin E, Wnuk S, ..., Lees N (2009) Structure of the nucleotide radical formed during reaction of CDP/TTP with
the E441Q-alpha2beta2 of E. coli ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573,
Cited=33, 19128178].
- Shanmugam M, Doan PE, Lees NS, ..., Hoffman BM (2009) Identification of protonated oxygenic ligands of ribonucleotide
reductase intermediate X. Journal of the American Chemical Society. [IF=2.573, Cited=29, 19220056].
- Offenbacher AR, Vassiliev IR, Seyedsayamdost MR, ..., Barry BA (2009) Redox-linked structural changes in ribonucleotide
reductase. Journal of the American Chemical Society. [IF=2.573, Cited=16, 19489635].
- Seyedsayamdost MR, Argirević T, Minnihan EC, ..., Bennati M (2009) Structural examination of the transient
3-aminotyrosyl radical on the PCET pathway of E. coli ribonucleotide reductase by multifrequency EPR spectroscopy.
Journal of the American Chemical Society. [IF=2.573, Cited=14, 19821570].
- Koo BJ, Huynh M, Halbach RL, ..., Nocera DG (2015) Modulation of Phenol Oxidation in Cofacial Dyads. Journal of the
American Chemical Society. [IF=2.573, Cited=2, 26305909].
- Olshansky L, Stubbe J, Nocera DG (2016) Charge-Transfer Dynamics at the α/β Subunit Interface of a Photochemical
Ribonucleotide Reductase. Journal of the American Chemical Society. [IF=2.573, Cited=18, 26710997].
- Doan PE, Shanmugam M, Stubbe J, Hoffman BM (2015) Composition and Structure of the Inorganic Core of Relaxed
Intermediate X(Y122F) of Escherichia coli Ribonucleotide Reductase. Journal of the American Chemical Society. [IF=2.573,
Cited=11, 26636616].
- Chang MCY, Miller S, Miller SE, ..., Nocera DG (2002) Nanosecond generation of tyrosyl radicals via laser-initiated
decaging of oxalate-modified amino acids. Journal of Organic Chemistry. [IF=0.885, Cited=0, 12227817].
- Chen B, Zhou X, Taghizadeh K, ..., Dedon PC (2007) GC/MS methods to quantify the 2-deoxypentos-4-ulose and
3'-phosphoglycolate pathways of 4' oxidation of 2-deoxyribose in DNA: application to DNA damage produced by gamma
radiation and bleomycin. Chemical Research in Toxicology. [IF=0.994, Cited=23, 17944541].
- Thomas WC, Brooks FP, Burnim AA, ..., Ando N (2019) Convergent allostery in ribonucleotide reductase. Nature
Communications. [IF=3.268, Cited=21, 31201319].
- Song DY, Pizano AA, Holder PG, ..., Nocera DG (2015) Direct Interfacial Y731 Oxidation in α2 by a
Photoβ2 Subunit of E. coli Class Ia Ribonucleotide Reductase. Chemical Science. [IF=1.563, Cited=8, 26504513].
- Kasanmascheff M, Lee W, Nick TU, ..., Bennati M (2015) Radical transfer in E. coli ribonucleotide reductase: a
NH2Y731/R411A-α mutant unmasks a new conformation of the pathway residue 731. Chemical
Science. [IF=1.563, Cited=20, 29899944].
- Stubbe J, Tian J (2003) Polyhydroxyalkanoate (PHA) hemeostasis: the role of PHA synthase. Natural Product Reports.
[IF=3.292, Cited=75, 14620841].
- Stubbe J (2003) Radicals with a controlled lifestyle. Chemical Communications. [IF=0.902, Cited=15, 14594260].
- Zhu Q, Costentin C, Stubbe J, Nocera DG (2023) Disulfide radical anion as a super-reductant in biology and photoredox
chemistry. Chemical Science. [IF=1.563, Cited=4, 37389245].
- Booker S, Broderick J, Stubbe J (1993) Ribonucleotide reductases: radical enzymes with suicidal tendencies. Biochemical
Society Transactions. [IF=0.925, Cited=5, 8224499].
- Parker MJ, Maggiolo AO, Thomas WC, ..., Stubbe J (2018) An endogenous dAMP ligand in Bacillus subtilis class Ib
RNR promotes assembly of a noncanonical dimer for regulation by dATP. Proceedings of the National Academy of Sciences of
the United States of America. [IF=2.765, Cited=14, 29712847].
- Pokern Y, Eltzner B, Huckemann SF, ..., Hiller M (2021) Statistical analysis of ENDOR spectra. Proceedings of the
National Academy of Sciences of the United States of America. [IF=2.765, Cited=3, 34215694].
- Chang MCY, Yee CS, Stubbe J, Nocera DG (2004) Turning on ribonucleotide reductase by light-initiated amino acid radical
generation. Proceedings of the National Academy of Sciences of the United States of America. [IF=2.765, Cited=25, 15123822].
- Zhang Z, An X, Yang K, ..., Huang M (2006) Nuclear localization of the Saccharomyces cerevisiae ribonucleotide reductase
small subunit requires a karyopherin and a WD40 repeat protein. Proceedings of the National Academy of Sciences of the
United States of America. [IF=2.765, Cited=35, 16432237].
- Denysenkov VP, Prisner TF, Stubbe J, Bennati M (2006) High-field pulsed electron-electron double resonance spectroscopy
to determine the orientation of the tyrosyl radicals in ribonucleotide reductase. Proceedings of the National Academy of
Sciences of the United States of America. [IF=2.765, Cited=63, 16938868].
- Wang J, Lohman GJS, Stubbe J (2007) Enhanced subunit interactions with gemcitabine-5'-diphosphate inhibit ribonucleotide
reductases. Proceedings of the National Academy of Sciences of the United States of America. [IF=2.765, Cited=78, 17726094].
- Cotruvo JA, Stubbe J (2008) NrdI, a flavodoxin involved in maintenance of the diferric-tyrosyl radical cofactor in
Escherichia coli class Ib ribonucleotide reductase. Proceedings of the National Academy of Sciences of the United States
of America. [IF=2.765, Cited=46, 18799738].
- Aye Y, Stubbe J (2011) Clofarabine 5'-di and -triphosphates inhibit human ribonucleotide reductase by altering the
quaternary structure of its large subunit. Proceedings of the National Academy of Sciences of the United States of
America. [IF=2.765, Cited=52, 21628579].
- Thompson LR, Zeng Q, Kelly L, ..., Chisholm SW (2011) Phage auxiliary metabolic genes and the redirection of
cyanobacterial host carbon metabolism. Proceedings of the National Academy of Sciences of the United States of America.
[IF=2.765, Cited=228, 21844365].
- Ando N, Brignole EJ, Zimanyi CM, ..., Drennan CL (2011) Structural interconversions modulate activity of Escherichia
coli ribonucleotide reductase. Proceedings of the National Academy of Sciences of the United States of America.
[IF=2.765, Cited=67, 22160671].
- Wickner WT, Stubbe J, Hirschberg CB, ..., Dowhan W (2011) Chris Raetz, scientist and enduring friend. Proceedings of the
National Academy of Sciences of the United States of America. [IF=2.765, Cited=4, 21969572].
- Pizano AA, Lutterman DA, Holder PG, ..., Nocera DG (2011) Photo-ribonucleotide reductase β2 by selective cysteine
labeling with a radical phototrigger. Proceedings of the National Academy of Sciences of the United States of America.
[IF=2.765, Cited=26, 22171005].
- Yao R, Zhang Z, An X, ..., Huang M (2003) Subcellular localization of yeast ribonucleotide reductase regulated by the
DNA replication and damage checkpoint pathways. Proceedings of the National Academy of Sciences of the United States of
America. [IF=2.765, Cited=103, 12732713].
- Zhang Y, Li H, Zhang C, ..., Huang M (2014) Conserved electron donor complex Dre2-Tah18 is required for ribonucleotide
reductase metallocofactor assembly and DNA synthesis. Proceedings of the National Academy of Sciences of the United
States of America. [IF=2.765, Cited=31, 24733891].
- Voegtli WC, Ge J, Perlstein DL, ..., Rosenzweig AC (2001) Structure of the yeast ribonucleotide reductase Y2Y4
heterodimer. Proceedings of the National Academy of Sciences of the United States of America. [IF=2.765, Cited=33, 11526233].
- Ge J, Perlstein DL, Nguyen HH, ..., Stubbe J (2001) Why multiple small subunits (Y2 and Y4) for yeast ribonucleotide
reductase? Toward understanding the role of Y4. Proceedings of the National Academy of Sciences of the United States of
America. [IF=2.765, Cited=21, 11526232].
- Mao SS, Johnston MI, Bollinger JM, Stubbe J (1989) Mechanism-based inhibition of a mutant Escherichia coli
ribonucleotide reductase (cysteine-225----serine) by its substrate CDP. Proceedings of the National Academy of Sciences
of the United States of America. [IF=2.765, Cited=12, 2493643].
- Booker S, Stubbe J (1993) Cloning, sequencing, and expression of the adenosylcobalamin-dependent ribonucleotide
reductase from Lactobacillus leichmannii. Proceedings of the National Academy of Sciences of the United States of
America. [IF=2.765, Cited=44, 8397403].
- Stubbe J (1998) Ribonucleotide reductases in the twenty-first century. Proceedings of the National Academy of Sciences
of the United States of America. [IF=2.765, Cited=53, 9501154].
- Lawrence CC, Bennati M, Obias HV, ..., Stubbe J (1999) High-field EPR detection of a disulfide radical anion in the
reduction of cytidine 5'-diphosphate by the E441Q R1 mutant of Escherichia coli ribonucleotide reductase. Proceedings of
the National Academy of Sciences of the United States of America. [IF=2.765, Cited=50, 10430881].
- Nguyen HH, Ge J, Perlstein DL, Stubbe J (1999) Purification of ribonucleotide reductase subunits Y1, Y2, Y3, and Y4 from
yeast: Y4 plays a key role in diiron cluster assembly. Proceedings of the National Academy of Sciences of the United
States of America. [IF=2.765, Cited=25, 10535923].
- Greene BL, Nocera DG, Stubbe J (2018) Basis of dATP inhibition of RNRs. Journal of Biological Chemistry. [IF=1.122,
Cited=5, 29959279].
- Zhang Y, Liu L, Wu X, ..., Huang M (2011) Investigation of in vivo diferric tyrosyl radical formation in Saccharomyces
cerevisiae Rnr2 protein: requirement of Rnr4 and contribution of Grx3/4 AND Dre2 proteins. Journal of Biological
Chemistry. [IF=1.122, Cited=36, 21931161].
- Aye Y, Long MJC, Stubbe J (2012) Mechanistic studies of semicarbazone triapine targeting human ribonucleotide reductase
in vitro and in mammalian cells: tyrosyl radical quenching not involving reactive oxygen species. Journal of Biological
Chemistry. [IF=1.122, Cited=41, 22915594].
- Zhang Y, An X, Stubbe J, Huang M (2013) Investigation of in vivo roles of the C-terminal tails of the small subunit
(ββ') of Saccharomyces cerevisiae ribonucleotide reductase: contribution to cofactor formation and intersubunit
association within the active holoenzyme. Journal of Biological Chemistry. [IF=1.122, Cited=6, 23532842].
- Li H, Stümpfig M, Zhang C, ..., Huang M (2017) The diferric-tyrosyl radical cluster of ribonucleotide reductase and
cytosolic iron-sulfur clusters have distinct and similar biogenesis requirements. Journal of Biological Chemistry.
[IF=1.122, Cited=13, 28515324].
- Huang M, Parker MJ, Stubbe J (2014) Choosing the right metal: case studies of class I ribonucleotide reductases. Journal
of Biological Chemistry. [IF=1.122, Cited=22, 25160629].
- Reece SY, Hodgkiss JM, Stubbe J, Nocera DG (2006) Proton-coupled electron transfer: the mechanistic underpinning for
radical transport and catalysis in biology. Philosophical Transactions of the Royal Society B: Biological Sciences.
[IF=1.629, Cited=115, 16873123].
- Kang G, Taguchi AT, Stubbe J, Drennan CL (2020) Structure of a trapped radical transfer pathway within a ribonucleotide
reductase holocomplex. Science. [IF=7.729, Cited=55, 32217749].
- Boal AK, Cotruvo JA, Stubbe J, Rosenzweig AC (2010) Structural basis for activation of class Ib ribonucleotide
reductase. Science. [IF=7.729, Cited=85, 20688982].
- Stubbe J (2011) Biochemistry. The two faces of SAM. Science. [IF=7.729, Cited=7, 21527702].
- Bollinger JM, Edmondson DE, Huynh BH, ..., Stubbe J (1991) Mechanism of assembly of the tyrosyl radical-dinuclear iron
cluster cofactor of ribonucleotide reductase. Science. [IF=7.729, Cited=127, 1650033].
- Kozarich JW, Worth L, Frank BL, ..., Stubbe J (1989) Sequence-specific isotope effects on the cleavage of DNA by
bleomycin. Science. [IF=7.729, Cited=33, 2476851].
- Licht S, Gerfen GJ, Stubbe J (1996) Thiyl radicals in ribonucleotide reductases. Science. [IF=7.729, Cited=130, 8560260].
- Stubbe J (1996) One of nature's macromolecular machines demystified. Science. [IF=7.729, Cited=0, 8966589].
- Stubbe J (1994) Binding site revealed of nature's most beautiful cofactor. Science. [IF=7.729, Cited=26, 7992049].
- York GM, Junker BH, Stubbe J, Sinskey AJ (2001) Accumulation of the PhaP phasin of Ralstonia eutropha is dependent on
production of polyhydroxybutyrate in cells. Journal of Bacteriology. [IF=0.898, Cited=69, 11418562].
- Zilles JL, Kappock TJ, Stubbe J, Downs DM (2001) Altered pathway routing in a class of Salmonella enterica serovar
Typhimurium mutants defective in aminoimidazole ribonucleotide synthetase. Journal of Bacteriology. [IF=0.898, Cited=0, 11244062].
- York GM, Stubbe J, Sinskey AJ (2001) New insight into the role of the PhaP phasin of Ralstonia eutropha in promoting
synthesis of polyhydroxybutyrate. Journal of Bacteriology. [IF=0.898, Cited=80, 11244085].
- York GM, Stubbe J, Sinskey AJ (2002) The Ralstonia eutropha PhaR protein couples synthesis of the PhaP phasin to the
presence of polyhydroxybutyrate in cells and promotes polyhydroxybutyrate production. Journal of Bacteriology.
[IF=0.898, Cited=82, 11741844].
- York GM, Lupberger J, Tian J, ..., Sinskey AJ (2003) Ralstonia eutropha H16 encodes two and possibly three intracellular
Poly[D-(-)-3-hydroxybutyrate] depolymerase genes. Journal of Bacteriology. [IF=0.898, Cited=65, 12813072].
- Tian J, Sinskey AJ, Stubbe J (2005) Kinetic studies of polyhydroxybutyrate granule formation in Wautersia eutropha H16
by transmission electron microscopy. Journal of Bacteriology. [IF=0.898, Cited=59, 15901706].
- Tian J, He A, Lawrence AG, ..., Stubbe J (2005) Analysis of transient polyhydroxybutyrate production in Wautersia
eutropha H16 by quantitative Western analysis and transmission electron microscopy. Journal of Bacteriology. [IF=0.898,
Cited=27, 15901707].
- Gerngross TU, Reilly P, Stubbe J, ..., Peoples OP (1993) Immunocytochemical analysis of poly-beta-hydroxybutyrate (PHB)
synthase in Alcaligenes eutrophus H16: localization of the synthase enzyme at the surface of PHB granules. Journal of
Bacteriology. [IF=0.898, Cited=47, 8349571].
- Dowhan W, Nikaido H, Stubbe J, ..., Modrich P (2013) Christian Raetz: scientist and friend extraordinaire. Annual Review
of Biochemistry. [IF=5.273, Cited=3, 23472605].
- Greene BL, Kang G, Cui C, ..., Stubbe J (2020) Ribonucleotide Reductases: Structure, Chemistry, and Metabolism Suggest
New Therapeutic Targets. Annual Review of Biochemistry. [IF=5.273, Cited=71, 32569524].
- Cotruvo JA, Stubbe J (2011) Class I ribonucleotide reductases: metallocofactor assembly and repair in vitro and in vivo.
Annual Review of Biochemistry. [IF=5.273, Cited=114, 21456967].
- Stubbe J (1989) Protein radical involvement in biological catalysis? Annual Review of Biochemistry. [IF=5.273,
Cited=55, 2673011].
- Stubbe J, Tian J, He A, ..., Liu P (2005) Nontemplate-dependent polymerization processes: polyhydroxyalkanoate synthases
as a paradigm. Annual Review of Biochemistry. [IF=5.273, Cited=72, 15952894].
- Narasimhan J, Letinski S, Jung SP, ..., Branstrom A (2022) Ribonucleotide reductase, a novel drug target for gonorrhea.
eLife. [IF=1.743, Cited=8, 35137690].
- Brignole EJ, Tsai KL, Chittuluru J, ..., Asturias F (2018) 3.3-Å resolution cryo-EM structure of human ribonucleotide
reductase with substrate and allosteric regulators bound. eLife. [IF=1.743, Cited=22, 29460780].
- Stubbe J (1990) Ribonucleotide reductases: amazing and confusing. Journal of Biological Chemistry. [IF=1.122, Cited=0, 2180924].
Publication with MISMATCHING institution:
- Steffensen LB, Stubbe J, Overgaard M, Larsen JH (2022) Tamoxifen-independent Cre-activity in SMMHC-CreER
T2 mice. Atherosclerosis Plus. [IF=0.56, Cited=3, 36644559].
- Lysgaard Poulsen J, Stubbe J, Lindholt JS (2016) Animal Models Used to Explore Abdominal Aortic Aneurysms: A Systematic
Review. European Journal of Vascular and Endovascular Surgery. [IF=3.001, Cited=59, 27543385].
- van Beijsterveldt AMCAM, Stubbe J, Schmikli SL, ..., Backx FJG (2014) Differences in injury risk and characteristics
between Dutch amateur and professional soccer players. Journal of Science and Medicine in Sport. [IF=1.612, Cited=36, 24636127].
- van Klij P, Langhout R, van Beijsterveldt AMC, ..., Tak I (2021) Do hip and groin muscle strength and symptoms change
throughout a football season in professional male football players? A prospective cohort study with repeated measures.
Journal of Science and Medicine in Sport. [IF=1.612, Cited=1, 33888428].
- Tak IJR, Langhout RFH, Groters S, ..., Kerkhoffs GMMJ (2016) A new clinical test for measurement of lower limb specific
range of motion in football players: Design, reliability and reference findings in non-injured players and those with
long-standing adductor-related groin pain. Physical Therapy in Sport. [IF=1.235, Cited=6, 27646678].
- Stubbe J, de Moor MHM, Boomsma DI, de Geus EJC (2006) The association between exercise participation and well-being: a
co-twin study. Preventive Medicine. [IF=1.601, Cited=59, 17059845].
- Stubbe J, Posthuma D, Boomsma DI, De Geus EJC (2005) Heritability of life satisfaction in adults: a twin-family study.
Psychological Medicine. [IF=2.136, Cited=55, 16219116].
- Stubbe J, Nocera DG (2021) Radicals in Biology: Your Life Is in Their Hands. Journal of the American Chemical Society.
[IF=2.573, Cited=14, 34423635].
- Ge J, Yu G, Ator MA, Stubbe J (2003) Pre-steady-state and steady-state kinetic analysis of E. coli class I
ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=78, 12939135].
- Seyedsayamdost MR, Yee CS, Stubbe J (2011) Use of 2,3,5-F(3)Y-β2 and 3-NH(2)Y-α2 to study proton-coupled electron
transfer in Escherichia coli ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=9, 21182280].
- Reece SY, Lutterman DA, Seyedsayamdost MR, ..., Nocera DG (2009) Re(bpy)(CO)3CN as a probe of conformational flexibility
in a photochemical ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=12, 19402704].
- Li P, Chakraborty S, Stubbe J (2009) Detection of covalent and noncovalent intermediates in the polymerization reaction
catalyzed by a C149S class III polyhydroxybutyrate synthase. Biochemistry. [IF=0.753, Cited=7, 19711985].
- Minnihan EC, Seyedsayamdost MR, Stubbe J (2009) Use of 3-aminotyrosine to examine the pathway dependence of radical
propagation in Escherichia coli ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=14, 19916558].
- Wang J, Lohman GJS, Stubbe J (2009) Mechanism of inactivation of human ribonucleotide reductase with p53R2 by
gemcitabine 5'-diphosphate. Biochemistry. [IF=0.753, Cited=37, 19899807].
- Artin E, Wang J, Lohman GJS, ..., Stubbe J (2009) Insight into the mechanism of inactivation of ribonucleotide reductase
by gemcitabine 5'-diphosphate in the presence or absence of reductant. Biochemistry. [IF=0.753, Cited=30, 19899770].
- Cotruvo JA, Stubbe J (2010) An active dimanganese(III)-tyrosyl radical cofactor in Escherichia coli class Ib
ribonucleotide reductase. Biochemistry. [IF=0.753, Cited=80, 20070127].
- Lohman GJS, Gerfen GJ, Stubbe J (2010) Inactivation of Lactobacillus leichmannii ribonucleotide reductase by
2',2'-difluoro-2'-deoxycytidine 5'-triphosphate: adenosylcobalamin destruction and formation of a nucleotide-based
radical. Biochemistry. [IF=0.753, Cited=4, 20088568].
- Lohman GJS, Stubbe J (2010) Inactivation of Lactobacillus leichmannii ribonucleotide reductase by
2',2'-difluoro-2'-deoxycytidine 5'-triphosphate: covalent modification. Biochemistry. [IF=0.753, Cited=8, 20088569].
- Reece SY, Seyedsayamdost MR, Stubbe J, Nocera DG (2007) Photoactive peptides for light-initiated tyrosyl radical
generation and transport into ribonucleotide reductase. Journal of the American Chemical Society. [IF=2.573, Cited=29, 17567129].
- Steffensen LB, Stubbe J, Lindholt JS, ..., Rasmussen LM (2021) Basement membrane collagen IV deficiency promotes
abdominal aortic aneurysm formation. Scientific Reports. [IF=1.312, Cited=12, 34145342].
- Minnihan EC, Ando N, Brignole EJ, ..., Stubbe J (2013) Generation of a stable, aminotyrosyl radical-induced α2β2 complex
of Escherichia coli class Ia ribonucleotide reductase. Proceedings of the National Academy of Sciences of the United
States of America. [IF=2.765, Cited=34, 23431160].
- Wei Y, Funk MA, Rosado LA, ..., Stubbe J (2014) The class III ribonucleotide reductase from Neisseria bacilliformis can
utilize thioredoxin as a reductant. Proceedings of the National Academy of Sciences of the United States of America.
[IF=2.765, Cited=15, 25157154].
- Song DY, Stubbe J, Nocera DG (2024) Protein engineering a PhotoRNR chimera based on a unifying evolutionary apparatus
among the natural classes of ribonucleotide reductases. Proceedings of the National Academy of Sciences of the United
States of America. [IF=2.765, Cited=0, 38648489].
- Wittenborn EC, Jost M, Wei Y, ..., Drennan CL (2016) Structure of the Catalytic Domain of the Class I
Polyhydroxybutyrate Synthase from Cupriavidus necator. Journal of Biological Chemistry. [IF=1.122, Cited=28, 27742839].
- Lin Q, Parker MJ, Taguchi AT, ..., Stubbe J (2017) Glutamate 52-β at the α/β subunit interface of Escherichia
coli class Ia ribonucleotide reductase is essential for conformational gating of radical transfer. Journal of
Biological Chemistry. [IF=1.122, Cited=17, 28377505].
- Isaksson GL, Stubbe J, Lyngs Hansen P, ..., Bie P (2013) Salt sensitivity of renin secretion, glomerular filtration rate
and blood pressure in conscious Sprague-Dawley rats. Acta Physiologica. [IF=1.288, Cited=12, 24188244].
- Thuesen AD, Lyngsø KS, Rasmussen L, ..., Hansen PBL (2016) P/Q-type and T-type voltage-gated calcium channels are
involved in the contraction of mammary and brain blood vessels from hypertensive patients. Acta Physiologica. [IF=1.288,
Cited=5, 27273014].
- Wintmo P, Johansen SH, Hansen PBL, ..., Stubbe J (2017) The water channel AQP1 is expressed in human atherosclerotic
vascular lesions and AQP1 deficiency augments angiotensin II-induced atherosclerosis in mice. Acta Physiologica.
[IF=1.288, Cited=14, 28129470].
- Bliekendaal S, Goossens L, Stubbe J (2017) Incidence and risk factors of injuries and their impact on academic success:
A prospective study in PETE students. Scandinavian Journal of Medicine and Science in Sports. [IF=1.602, Cited=4, 28139042].
- van Beijsterveldt AMC, Thijs KM, Backx FJG, ..., Stubbe J (2015) Sports injuries and illnesses during the European Youth
Olympic Festival 2013. British Journal of Sports Medicine. [IF=5.885, Cited=7, 25573616].
- Richardson A, Clarsen B, Verhagen EALM, Stubbe J (2017) High prevalence of self-reported injuries and illnesses in
talented female athletes. BMJ Open Sport and Exercise Medicine. [IF=1.511, Cited=16, 28761701].
- Jensen BL, Stubbe J, Hansen PB, ..., Skøtt O (2001) Localization of prostaglandin E(2) EP2 and EP4 receptors in the rat
kidney. American Journal of Physiology - Renal Physiology. [IF=1.073, Cited=43, 11352840].
- Stubbe J, Brouwer W, Delnoij DMJ (2007) Patients' experiences with quality of hospital care: the Consumer Quality Index
Cataract Questionnaire. BMC Ophthalmology. [IF=1.152, Cited=34, 17877840].
- Kleinlooh ST, Samaritter RA, van Rijn RM, ..., Stubbe J (2021) Dance Movement Therapy for Clients With a Personality
Disorder: A Systematic Review and Thematic Synthesis. Frontiers in Psychology. [IF=1.422, Cited=1, 33868071].
- Stubbe J, Booker S, Broderick J, ..., Yu GX (1993) Ribonucleotide reductases: radical enzymes with suicidal tendencies.
None. [IF=None, Cited=0, 8247726].
Publication with MISSING institution:
- Yuan W, Jia Y, Tian J, ..., Stubbe J (2001) Class I and III polyhydroxyalkanoate synthases from Ralstonia eutropha and
Allochromatium vinosum: characterization and substrate specificity studies. Archives of Biochemistry and Biophysics.
[IF=0.874, Cited=66, 11566031].
- Bennati M, Farrar CT, Bryant JA, ..., Griffin RG (1999) Pulsed electron-nuclear double resonance (ENDOR) at 140 GHz.
Journal of Magnetic Resonance. [IF=0.822, Cited=48, 10341127].
- Stubbe J (1983) Mechanism of B12-dependent ribonucleotide reductase. Molecular and Cellular Biochemistry. [IF=0.788,
Cited=8, 6341812].
- Lawrence AG, Schoenheit J, He A, ..., Sinskey AJ (2005) Transcriptional analysis of Ralstonia eutropha genes related to
poly-(R)-3-hydroxybutyrate homeostasis during batch fermentation. Applied Microbiology and Biotechnology. [IF=1.275,
Cited=25, 15924243].
- Mortelé KJ, Stubbe J, Praet M, ..., Kunnen M (2000) Intratumoral steatosis in focal nodular hyperplasia coinciding with
diffuse hepatic steatosis: CT and MRI findings with histologic correlation. None. [IF=None, Cited=15, 10675461].
- De Moor MHM, Stubbe J, Boomsma DI, De Geus EJC (2006) Exercise participation and self-rated health: do common genes
explain the association? European Journal of Epidemiology. [IF=3.783, Cited=18, 17195050].
- Blumberg K, Stubbe J (1975) Chemical specificity of pyruvate kinase from yeast. None. [IF=None, Cited=3, 1093568].
- Cheng YS, Murray M, Schendel F, ..., Stubbe J (1987) Chemical characterization of phosphoribosylamine, a substrate for
newly discovered trifunctional protein containing glycineamide ribonucleotide synthetase activity. None. [IF=None,
Cited=4, 3673708].
- Bollinger JM, Tong WH, Ravi N, ..., Stubbe J (1995) Use of rapid kinetics methods to study the assembly of the diferric-
tyrosyl radical cofactor of E. coli ribonucleotide reductase. None. [IF=None, Cited=38, 8524156].
- Ashley GW, Stubbe J (1985) Current ideas on the chemical mechanism of ribonucleotide reductases. Pharmacology and
Therapeutics. [IF=2.796, Cited=10, 3916287].
- Seyedsayamdost MR, Stubbe J (2009) Replacement of Y730 and Y731 in the alpha2 subunit of Escherichia coli ribonucleotide
reductase with 3-aminotyrosine using an evolved suppressor tRNA/tRNA-synthetase pair. None. [IF=None, Cited=5, 19632469].
- Reece SY, Stubbe J, Nocera DG (2005) pH Dependence of charge transfer between tryptophan and tyrosine in dipeptides.
None. [IF=None, Cited=11, 15694351].
- Hassan AQ, Stubbe J (2008) Mapping the subunit interface of ribonucleotide reductase (RNR) using photo cross-linking.
Bioorganic and Medicinal Chemistry Letters. [IF=0.704, Cited=3, 18762419].
- Chen J, Stubbe J (2004) Bleomycins: new methods will allow reinvestigation of old issues. Current Opinion in Chemical
Biology. [IF=1.51, Cited=25, 15062779].
- Aye Y, Brignole EJ, Long MJC, ..., Stubbe J (2012) Clofarabine targets the large subunit (α) of human ribonucleotide
reductase in live cells by assembly into persistent hexamers. None. [IF=None, Cited=36, 22840768].
- Lee YD, Wang J, Stubbe J, Elledge SJ (2008) Dif1 is a DNA-damage-regulated facilitator of nuclear import for
ribonucleotide reductase. Molecular Cell. [IF=2.773, Cited=78, 18851834].
- Zimanyi CM, Ando N, Brignole EJ, ..., Drennan CL (2012) Tangled up in knots: structures of inactivated forms of E. coli
class Ia ribonucleotide reductase. Structure. [IF=1.155, Cited=36, 22727814].
- De Moor MHM, Beem AL, Stubbe J, ..., De Geus EJC (2006) Regular exercise, anxiety, depression and personality: a
population-based study. Preventive Medicine. [IF=1.601, Cited=185, 16439008].
- Mathews II, Kappock TJ, Stubbe J, Ealick SE (1999) Crystal structure of Escherichia coli PurE, an unusual mutase in the
purine biosynthetic pathway. Structure. [IF=1.155, Cited=25, 10574791].
- Li C, Kappock TJ, Stubbe J, ..., Ealick SE (1999) X-ray crystal structure of aminoimidazole ribonucleotide synthetase
(PurM), from the Escherichia coli purine biosynthetic pathway at 2.5 A resolution. Structure. [IF=1.155, Cited=37, 10508786].
- Vanderwall DE, Lui SM, Wu W, ..., Stubbe J (1997) A model of the structure of HOO-Co.bleomycin bound to d(CCAGTACTGG):
recognition at the d(GpT) site and implications for double-stranded DNA cleavage. None. [IF=None, Cited=27, 9195876].
- Kappock TJ, Ealick SE, Stubbe J (2000) Modular evolution of the purine biosynthetic pathway. Current Opinion in Chemical
Biology. [IF=1.51, Cited=54, 11006546].
- Lawrence CC, Stubbe J (1998) The function of adenosylcobalamin in the mechanism of ribonucleoside triphosphate reductase
from Lactobacillus leichmannii. Current Opinion in Chemical Biology. [IF=1.51, Cited=14, 9818192].
- Middeldorp CM, Stubbe J, Cath DC, Boomsma DI (2005) Familial clustering in burnout: a twin-family study. Psychological
Medicine. [IF=2.136, Cited=10, 15842034].
- Ravichandran K, Minnihan EC, Lin Q, ..., Stubbe J (2017) Glutamate 350 Plays an Essential Role in Conformational Gating
of Long-Range Radical Transport in Escherichia coli Class Ia Ribonucleotide Reductase. Biochemistry. [IF=0.753,
Cited=11, 28103007].
- Lee W, Kasanmascheff M, Huynh M, ..., Stubbe J (2018) Properties of Site-Specifically Incorporated 3-Aminotyrosine in
Proteins To Study Redox-Active Tyrosines: Escherichia coli Ribonucleotide Reductase as a Paradigm. Biochemistry.
[IF=0.753, Cited=8, 29630358].
- Greene BL, Stubbe J, Nocera DG (2019) Selenocysteine Substitution in a Class I Ribonucleotide Reductase. Biochemistry.
[IF=0.753, Cited=8, 31774661].
- Ravichandran KR, Zong AB, Taguchi AT, ..., Tommos C (2017) Formal Reduction Potentials of Difluorotyrosine and
Trifluorotyrosine Protein Residues: Defining the Thermodynamics of Multistep Radical Transfer. Journal of the American
Chemical Society. [IF=2.573, Cited=22, 28171730].
- Greene BL, Stubbe J, Nocera DG (2018) Photochemical Rescue of a Conformationally Inactivated Ribonucleotide Reductase.
Journal of the American Chemical Society. [IF=2.573, Cited=7, 30347141].
- Wei Y, Li B, Prakash D, ..., Stubbe J (2015) A Ferredoxin Disulfide Reductase Delivers Electrons to the Methanosarcina
barkeri Class III Ribonucleotide Reductase. Biochemistry. [IF=0.753, Cited=15, 26536144].
- Ando N, Li H, Brignole EJ, ..., Drennan CL (2016) Allosteric Inhibition of Human Ribonucleotide Reductase by dATP
Entails the Stabilization of a Hexamer. Biochemistry. [IF=0.753, Cited=30, 26727048].
- Minnihan EC, Nocera DG, Stubbe J (2013) Reversible, long-range radical transfer in E. coli class Ia ribonucleotide
reductase. Accounts of Chemical Research. [IF=3.533, Cited=133, 23730940].
- Absalon MJ, Kozarich JW, Stubbe J (1995) Sequence-specific double-strand cleavage of DNA by Fe-bleomycin. 1. The
detection of sequence-specific double-strand breaks using hairpin oligonucleotides. Biochemistry. [IF=0.753, Cited=39, 7531498].
- Absalon MJ, Wu W, Kozarich JW, Stubbe J (1995) Sequence-specific double-strand cleavage of DNA by Fe-bleomycin. 2.
Mechanism and dynamics. Biochemistry. [IF=0.753, Cited=49, 7531499].
- Rudolph J, Stubbe J (1995) Investigation of the mechanism of phosphoribosylamine transfer from glutamine
phosphoribosylpyrophosphate amidotransferase to glycinamide ribonucleotide synthetase. Biochemistry. [IF=0.753,
Cited=51, 7532005].
- Worth L, Frank BL, Christner DF, ..., Kozarich JW (1993) Isotope effects on the cleavage of DNA by bleomycin: mechanism
and modulation. Biochemistry. [IF=0.753, Cited=27, 7680571].
- Meyer E, Leonard NJ, Bhat B, ..., Smith JM (1992) Purification and characterization of the purE, purK, and purC gene
products: identification of a previously unrecognized energy requirement in the purine biosynthetic pathway.
Biochemistry. [IF=0.753, Cited=42, 1534690].
- Mao SS, Holler TP, Yu GX, ..., Stubbe J (1992) A model for the role of multiple cysteine residues involved in
ribonucleotide reduction: amazing and still confusing. Biochemistry. [IF=0.753, Cited=102, 1382592].
- Mao SS, Holler TP, Bollinger JM, ..., Stubbe J (1992) Interaction of C225SR1 mutant subunit of ribonucleotide reductase
with R2 and nucleoside diphosphates: tales of a suicidal enzyme. Biochemistry. [IF=0.753, Cited=23, 1390750].
- Mao SS, Yu GX, Yu G, ..., Stubbe J (1992) Characterization of C439SR1, a mutant of Escherichia coli ribonucleotide
diphosphate reductase: evidence that C439 is a residue essential for nucleotide reduction and C439SR1 is a protein
possessing novel thioredoxin-like activity. Biochemistry. [IF=0.753, Cited=45, 1390751].
- Mueller EJ, Meyer E, Rudolph J, ..., Stubbe J (1994) N5-carboxyaminoimidazole ribonucleotide: evidence for a new
intermediate and two new enzymatic activities in the de novo purine biosynthetic pathway of Escherichia coli.
Biochemistry. [IF=0.753, Cited=54, 8117684].
- Gerngross TU, Snell KD, Peoples OP, ..., Stubbe J (1994) Overexpression and purification of the soluble
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involve C-1' chemistry. Nucleic Acids Research. [IF=4.663, Cited=4, 1380696].
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unusual deoxyribose conformation. Nucleic Acids Research. [IF=4.663, Cited=18, 11504879].
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complexed with d(CCAGGCCTGG)2: evidence for binding by partial intercalation. Nucleic Acids Research. [IF=4.663,
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oligonucleotides containing an internal 3'-phosphoglycolate, 5'-phosphate gapped lesion. Nucleic Acids Research.
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structure and dynamics. Nucleic Acids Research. [IF=4.663, Cited=42, 18025040].
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modes can result in double-stranded DNA cleavage. Nucleic Acids Research. [IF=4.663, Cited=76, 18492718].
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Nephrology Dialysis Transplantation. [IF=1.566, Cited=5, 11682677].
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and structural similarities. Cold Spring Harbor Symposia on Quantitative Biology. [IF=0.889, Cited=0, 3331345].
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None. [IF=None, Cited=0, 9958452].
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adrenal steroids. None. [IF=None, Cited=9, 15283770].
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thrombosed arterial grafts. None. [IF=None, Cited=2, 3459452].
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reductase. Journal of Bacteriology. [IF=0.898, Cited=26, 3511029].
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Contemporary Dance Students. Medical Problems of Performing Artists. [IF=0.628, Cited=6, 32870963].
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3' carbon-hydrogen bond cleavage and inactivation by nucleotide analogs. Journal of Biological Chemistry. [IF=1.122,
Cited=0, 3005293].
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3' carbon-hydrogen bond cleavage and a unique role for coenzyme B12. Journal of Biological Chemistry. [IF=1.122,
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catalyzing deoxyuridine hydroxylation. Journal of Biological Chemistry. [IF=1.122, Cited=0, 4040518].
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reductase from Lactobacillus leichmannii. Journal of Biological Chemistry. [IF=1.122, Cited=0, 6337141].
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for 3'-C--H bond cleavage. Journal of Biological Chemistry. [IF=1.122, Cited=0, 6337142].
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3'-C--H bond cleavage. Journal of Biological Chemistry. [IF=1.122, Cited=0, 6997288].
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Lactobacillus leichmannii. Evidence for 3' C--H bond cleavage. Journal of Biological Chemistry. [IF=1.122, Cited=0, 7014560].
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Biological Chemistry. [IF=1.122, Cited=0, 924996].